#include <elxSumSquaredTissueVolumeDifferenceMetric.h>

Detailed Description

template<class TElastix>
class elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >

A metric based on the itk::SumSquaredTissueVolumeDifferenceImageToImageMetric.

Warning: : This metric has only been evaluated on CT, where image intensity is monotonically related to tissue density, and therefore mass. Performance in other modalities such as MRI has not been explored.

The parameters used in this class are:

Parameters:

Metric: Select this metric as follows:
(Metric "SumSquaredTissueVolumeDifference")

AirValue: Intensity value of air.
example: (AirValue -1000.0)
Default is -1000.0.

TissueValue: Intensity value of tissue.
example: (TissueValue 55.0)
Default is 55.0.

See also: SumSquaredTissueVolumeDifferenceImageToImageMetric

Definition at line 50 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

Inheritance diagram for elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >:

[legend]

Public Types
using	ConstPointer = itk::SmartPointer< const Self >

using	ITKBaseType = typename Superclass2::ITKBaseType

using	Pointer = itk::SmartPointer< Self >

using	Self = SumSquaredTissueVolumeDifferenceMetric

using	Superclass1 = itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType >

using	Superclass2 = MetricBase< TElastix >

using	TransformType = typename Superclass::AdvancedTransformType

Public Types inherited from itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
using	ConstPointer = SmartPointer< const Self >

using	DerivativeValueType = typename DerivativeType::ValueType

using	FixedImageLimiterOutputType = typename FixedImageLimiterType::OutputType

using	FixedImageLimiterType = LimiterFunctionBase< RealType, FixedImageDimension >

using	FixedImagePixelType = typename FixedImageType::PixelType

using	ImageSampleContainerPointer = typename ImageSamplerType::OutputVectorContainerPointer

using	ImageSampleContainerType = typename ImageSamplerType::OutputVectorContainerType

using	ImageSamplerPointer = typename ImageSamplerType::Pointer

using	ImageSamplerType = ImageSamplerBase< FixedImageType >

using	InternalMatrixType = typename TransformType::InternalMatrixType

using	JacobianOfSpatialHessianType = typename TransformType::JacobianOfSpatialHessianType

using	JacobianOfSpatialJacobianType = typename TransformType::JacobianOfSpatialJacobianType

using	MovingImageDerivativeScalesType = FixedArray< double, Self::MovingImageDimension >

using	MovingImageLimiterOutputType = typename MovingImageLimiterType::OutputType

using	MovingImageLimiterType = LimiterFunctionBase< RealType, MovingImageDimension >

using	MovingImageRegionType = typename MovingImageType::RegionType

using	Pointer = SmartPointer< Self >

using	Self = SumSquaredTissueVolumeDifferenceImageToImageMetric

using	SpatialHessianType = typename TransformType::SpatialHessianType

using	SpatialJacobianType = typename TransformType::SpatialJacobianType

using	Superclass = AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >

using	TransformType = typename Superclass::AdvancedTransformType

Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
using	AdvancedTransformType = AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >

using	BSplineOrder1TransformPointer = typename BSplineOrder1TransformType::Pointer

using	BSplineOrder1TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >

using	BSplineOrder2TransformPointer = typename BSplineOrder2TransformType::Pointer

using	BSplineOrder2TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >

using	BSplineOrder3TransformPointer = typename BSplineOrder3TransformType::Pointer

using	BSplineOrder3TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >

using	CombinationTransformType = AdvancedCombinationTransform< ScalarType, FixedImageDimension >

using	ConstPointer = SmartPointer< const Self >

using	DerivativeValueType = typename DerivativeType::ValueType

using	FixedImageLimiterOutputType = typename FixedImageLimiterType::OutputType

using	FixedImageLimiterPointer = typename FixedImageLimiterType::Pointer

using	FixedImageLimiterType = LimiterFunctionBase< RealType, FixedImageDimension >

using	FixedImageMaskSpatialObject2Type = ImageMaskSpatialObject< Self::FixedImageDimension >

using	FixedImagePixelType = typename FixedImageType::PixelType

using	FixedImagePointer = typename FixedImageType::Pointer

using	HessianType = vnl_sparse_matrix< HessianValueType >

using	HessianValueType = typename DerivativeType::ValueType

using	ImageSampleContainerPointer = typename ImageSamplerType::OutputVectorContainerPointer

using	ImageSampleContainerType = typename ImageSamplerType::OutputVectorContainerType

using	ImageSamplerPointer = typename ImageSamplerType::Pointer

using	ImageSamplerType = ImageSamplerBase< FixedImageType >

using	MovingImageDerivativeScalesType = FixedArray< double, Self::MovingImageDimension >

using	MovingImageLimiterOutputType = typename MovingImageLimiterType::OutputType

using	MovingImageLimiterPointer = typename MovingImageLimiterType::Pointer

using	MovingImageLimiterType = LimiterFunctionBase< RealType, MovingImageDimension >

using	MovingImageMaskSpatialObject2Type = ImageMaskSpatialObject< Self::MovingImageDimension >

using	MovingImagePointer = typename MovingImageType::Pointer

using	MovingImageRegionType = typename MovingImageType::RegionType

using	NumberOfParametersType = typename AdvancedTransformType::NumberOfParametersType

using	Pointer = SmartPointer< Self >

using	ScalarType = typename TransformType::ScalarType

using	Self = AdvancedImageToImageMetric

using	Superclass = ImageToImageMetric< TFixedImage, TMovingImage >

using	ThreaderType = itk::PlatformMultiThreader

using	ThreadInfoType = typename ThreaderType::WorkUnitInfo

Public Types inherited from elastix::MetricBase< TElastix >
using	AdvancedMetricType = itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >

using	CoordinateRepresentationType = typename ITKBaseType::ParametersValueType

using	ElastixType = TElastix

using	FixedImageType = typename ElastixType::FixedImageType

using	FixedPointSetType = itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >

using	FixedPointType = typename FixedImageType::PointType

using	FixedPointValueType = typename FixedPointType::ValueType

using	ImageSamplerBaseType = typename AdvancedMetricType::ImageSamplerType

using	ITKBaseType = itk::SingleValuedCostFunction

using	MeasureType = typename ITKBaseType::MeasureType

using	MovingImageDerivativeScalesType = typename AdvancedMetricType::MovingImageDerivativeScalesType

using	MovingImageType = typename ElastixType::MovingImageType

using	MovingPointSetType = itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >

using	MovingPointType = typename MovingImageType::PointType

using	MovingPointValueType = typename MovingPointType::ValueType

using	RegistrationType = typename ElastixType::RegistrationBaseType

using	Self = MetricBase

using	Superclass = BaseComponentSE< TElastix >

Public Types inherited from elastix::BaseComponentSE< TElastix >
using	ConfigurationPointer = Configuration::Pointer

using	ElastixType = TElastix

using	RegistrationType = typename ElastixType::RegistrationBaseType

using	Self = BaseComponentSE

using	Superclass = BaseComponent

Public Member Functions
void	BeforeEachResolution () override

	elxClassNameMacro ("SumSquaredTissueVolumeDifference")

virtual const char *	GetClassName () const

void	Initialize () override

	ITK_DISALLOW_COPY_AND_MOVE (SumSquaredTissueVolumeDifferenceMetric)

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

Public Member Functions inherited from itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual RealType	GetAirValue () const

virtual const char *	GetClassName () const

void	GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const override

virtual RealType	GetTissueValue () const

MeasureType	GetValue (const TransformParametersType &parameters) const override

void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const override

void	GetValueAndDerivativeSingleThreaded (const TransformParametersType &parameters, MeasureType &measure, DerivativeType &derivative) const

virtual MeasureType	GetValueSingleThreaded (const TransformParametersType &parameters) const

	ITK_DISALLOW_COPY_AND_MOVE (SumSquaredTissueVolumeDifferenceImageToImageMetric)

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

virtual void	SetAirValue (RealType _arg)

virtual void	SetTissueValue (RealType _arg)

Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const

virtual const char *	GetClassName () const

virtual const FixedImageLimiterType *	GetFixedImageLimiter ()

virtual double	GetFixedLimitRangeRatio () const

virtual ImageSamplerType *	GetImageSampler () const

virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()

virtual const MovingImageLimiterType *	GetMovingImageLimiter ()

virtual double	GetMovingLimitRangeRatio () const

virtual double	GetRequiredRatioOfValidSamples () const

virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const

virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const

const AdvancedTransformType *	GetTransform () const override

virtual bool	GetUseFixedImageLimiter () const

virtual bool	GetUseImageSampler () const

virtual const bool &	GetUseMetricSingleThreaded ()

virtual bool	GetUseMovingImageDerivativeScales () const

virtual bool	GetUseMovingImageLimiter () const

virtual const bool &	GetUseMultiThread ()

void	Initialize () override

	ITK_DISALLOW_COPY_AND_MOVE (AdvancedImageToImageMetric)

	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)

virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)

virtual void	SetFixedLimitRangeRatio (double _arg)

virtual void	SetImageSampler (ImageSamplerType *_arg)

virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)

virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)

virtual void	SetMovingLimitRangeRatio (double _arg)

virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)

virtual void	SetRequiredRatioOfValidSamples (double _arg)

virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)

virtual void	SetTransform (AdvancedTransformType *arg)

virtual void	SetUseMetricSingleThreaded (bool _arg)

virtual void	SetUseMovingImageDerivativeScales (bool _arg)

virtual void	SetUseMultiThread (bool _arg)

virtual void	UseMetricSingleThreadedOff ()

virtual void	UseMetricSingleThreadedOn ()

virtual void	UseMultiThreadOff ()

virtual void	UseMultiThreadOn ()

Public Member Functions inherited from elastix::MetricBase< TElastix >
void	AfterEachIterationBase () override

void	BeforeEachResolutionBase () override

virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler () const

virtual bool	GetAdvancedMetricUseImageSampler () const

ITKBaseType *	GetAsITKBaseType ()

const ITKBaseType *	GetAsITKBaseType () const

virtual const char *	GetClassName () const

virtual MeasureType	GetCurrentExactMetricValue () const

virtual bool	GetShowExactMetricValue () const

	ITK_DISALLOW_COPY_AND_MOVE (MetricBase)

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

virtual void	SelectNewSamples ()

virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)

Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
void	AddTargetCellToIterationInfo (const char *const name)

Configuration *	GetConfiguration () const

ElastixType *	GetElastix () const

xl::xoutbase &	GetIterationInfoAt (const char *const name)

RegistrationType *	GetRegistration () const

	ITK_DISALLOW_COPY_AND_MOVE (BaseComponentSE)

int	RemoveTargetCellFromIterationInfo (const char *const name)

void	SetConfiguration (Configuration *_arg)

void	SetElastix (ElastixType *_arg)

Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration ()

virtual void	AfterEachIterationBase ()

virtual void	AfterEachResolution ()

virtual void	AfterEachResolutionBase ()

virtual void	AfterRegistration ()

virtual void	AfterRegistrationBase ()

virtual int	BeforeAll ()

virtual int	BeforeAllBase ()

virtual void	BeforeEachResolution ()

virtual void	BeforeEachResolutionBase ()

virtual void	BeforeRegistration ()

virtual void	BeforeRegistrationBase ()

virtual const char *	elxGetClassName () const

const char *	GetComponentLabel () const

	ITK_DISALLOW_COPY_AND_MOVE (BaseComponent)

	itkTypeMacroNoParent (BaseComponent)

void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static Pointer	New ()

Static Public Member Functions inherited from elastix::BaseComponent
template<typename TBaseComponent >
static auto	AsITKBaseType (TBaseComponent *const baseComponent) -> decltype(baseComponent->GetAsITKBaseType())

static void	InitializeElastixExecutable ()

static bool	IsElastixLibrary ()

Protected Member Functions
	SumSquaredTissueVolumeDifferenceMetric ()=default

	~SumSquaredTissueVolumeDifferenceMetric () override=default

Protected Member Functions inherited from itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
void	AfterThreadedGetValue (MeasureType &value) const override

void	AfterThreadedGetValueAndDerivative (MeasureType &measure, DerivativeType &derivative) const override

bool	EvaluateInverseSpatialJacobian (const SpatialJacobianType &spatialJacobian, const RealType spatialJacobianDeterminant, SpatialJacobianType &inverseSpatialJacobian) const

void	EvaluateJacobianOfSpatialJacobianDeterminantInnerProduct (const JacobianOfSpatialJacobianType &jacobianOfSpatialJacobian, const SpatialJacobianType &inverseSpatialJacobian, DerivativeType &jacobianOfSpatialJacobianDeterminant) const

void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const override

void	PrintSelf (std::ostream &os, Indent indent) const override

	SumSquaredTissueVolumeDifferenceImageToImageMetric ()

void	ThreadedGetValue (ThreadIdType threadID) override

void	ThreadedGetValueAndDerivative (ThreadIdType threadId) override

void	UpdateValueAndDerivativeTerms (const RealType fixedImageValue, const RealType movingImageValue, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji, const RealType spatialJacobianDeterminant, const DerivativeType &jacobianOfSpatialJacobianDeterminant, MeasureType &measure, DerivativeType &deriv) const

	~SumSquaredTissueVolumeDifferenceImageToImageMetric () override=default

Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
	AdvancedImageToImageMetric ()

virtual void	AfterThreadedGetValue (MeasureType &value) const

virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const

virtual void	CheckForAdvancedTransform ()

virtual void	CheckForBSplineInterpolator ()

virtual void	CheckForBSplineTransform () const

virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const

virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const

virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const

virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const

bool	FastEvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient, const ThreadIdType threadId) const

virtual void	InitializeImageSampler ()

virtual void	InitializeLimiters ()

virtual void	InitializeThreadingParameters () const

virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)

void	LaunchGetValueAndDerivativeThreaderCallback () const

void	LaunchGetValueThreaderCallback () const

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetUseFixedImageLimiter (bool _arg)

virtual void	SetUseImageSampler (bool _arg)

virtual void	SetUseMovingImageLimiter (bool _arg)

virtual void	ThreadedGetValue (ThreadIdType threadID)

virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)

MovingImagePointType	TransformPoint (const FixedImagePointType &fixedImagePoint) const

	~AdvancedImageToImageMetric () override=default

Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)

	MetricBase ()=default

	~MetricBase () override=default

Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default

	~BaseComponentSE () override=default

Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default

virtual	~BaseComponent ()=default

Private Attributes
	elxOverrideGetSelfMacro

Additional Inherited Members
Protected Types inherited from itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
using	BSplineInterpolatorType = BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >

using	CentralDifferenceGradientFilterType = GradientImageFilter< MovingImageType, RealType, RealType >

using	FixedImageIndexType = typename FixedImageType::IndexType

using	FixedImageIndexValueType = typename FixedImageIndexType::IndexValueType

using	FixedImagePointType = typename TransformType::InputPointType

using	MovingImageContinuousIndexType = typename InterpolatorType::ContinuousIndexType

using	MovingImageDerivativeType = typename BSplineInterpolatorType::CovariantVectorType

using	MovingImageIndexType = typename MovingImageType::IndexType

using	MovingImagePointType = typename TransformType::OutputPointType

using	NonZeroJacobianIndicesType = typename AdvancedTransformType::NonZeroJacobianIndicesType

Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
using	BSplineInterpolatorFloatPointer = typename BSplineInterpolatorFloatType::Pointer

using	BSplineInterpolatorFloatType = BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >

using	BSplineInterpolatorPointer = typename BSplineInterpolatorType::Pointer

using	BSplineInterpolatorType = BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >

using	CentralDifferenceGradientFilterPointer = typename CentralDifferenceGradientFilterType::Pointer

using	CentralDifferenceGradientFilterType = GradientImageFilter< MovingImageType, RealType, RealType >

using	FixedImageIndexType = typename FixedImageType::IndexType

using	FixedImageIndexValueType = typename FixedImageIndexType::IndexValueType

using	FixedImagePointType = typename TransformType::InputPointType

using	LinearInterpolatorPointer = typename LinearInterpolatorType::Pointer

using	LinearInterpolatorType = AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >

using	MovingImageContinuousIndexType = typename InterpolatorType::ContinuousIndexType

using	MovingImageDerivativeType = typename BSplineInterpolatorType::CovariantVectorType

using	MovingImageIndexType = typename MovingImageType::IndexType

using	MovingImagePointType = typename TransformType::OutputPointType

using	NonZeroJacobianIndicesType = typename AdvancedTransformType::NonZeroJacobianIndicesType

using	ReducedBSplineInterpolatorPointer = typename ReducedBSplineInterpolatorType::Pointer

using	ReducedBSplineInterpolatorType = ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >

Protected Types inherited from elastix::MetricBase< TElastix >
using	ExactMetricImageSamplerPointer = typename ExactMetricImageSamplerType::Pointer

using	ExactMetricImageSamplerType = itk::ImageGridSampler< FixedImageType >

using	ExactMetricSampleGridSpacingType = typename ExactMetricImageSamplerType::SampleGridSpacingType

using	ParametersType = typename ITKBaseType::ParametersType

Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)

Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
AdvancedTransformType::Pointer	m_AdvancedTransform { nullptr }

BSplineInterpolatorPointer	m_BSplineInterpolator { nullptr }

BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat { nullptr }

CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter { nullptr }

FixedImageLimiterPointer	m_FixedImageLimiter { nullptr }

FixedImageLimiterOutputType	m_FixedImageMaxLimit { 1 }

FixedImageLimiterOutputType	m_FixedImageMinLimit { 0 }

FixedImagePixelType	m_FixedImageTrueMax { 1 }

FixedImagePixelType	m_FixedImageTrueMin { 0 }

double	m_FixedLimitRangeRatio { 0.01 }

std::unique_ptr< AlignedGetValueAndDerivativePerThreadStruct[]>	m_GetValueAndDerivativePerThreadVariables

ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize { 0 }

std::unique_ptr< AlignedGetValuePerThreadStruct[]>	m_GetValuePerThreadVariables { nullptr }

ThreadIdType	m_GetValuePerThreadVariablesSize { 0 }

ImageSamplerPointer	m_ImageSampler { nullptr }

bool	m_InterpolatorIsBSpline { false }

bool	m_InterpolatorIsBSplineFloat { false }

bool	m_InterpolatorIsLinear { false }

bool	m_InterpolatorIsReducedBSpline { false }

LinearInterpolatorPointer	m_LinearInterpolator { nullptr }

MovingImageLimiterPointer	m_MovingImageLimiter { nullptr }

MovingImageLimiterOutputType	m_MovingImageMaxLimit { 1 }

MovingImageLimiterOutputType	m_MovingImageMinLimit { 0 }

MovingImagePixelType	m_MovingImageTrueMax { 1 }

MovingImagePixelType	m_MovingImageTrueMin { 0 }

double	m_MovingLimitRangeRatio { 0.01 }

ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator { nullptr }

MultiThreaderParameterType	m_ThreaderMetricParameters

bool	m_TransformIsAdvanced { false }

bool	m_TransformIsBSpline { false }

bool	m_UseMetricSingleThreaded { true }

bool	m_UseMultiThread { false }

bool	m_UseOpenMP

Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue { 0.0 }

unsigned int	m_ExactMetricEachXNumberOfIterations { 1 }

ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing

ExactMetricImageSamplerPointer	m_ExactMetricSampler { nullptr }

bool	m_ShowExactMetricValue { false }

Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration {}

itk::WeakPointer< TElastix >	m_Elastix {}

RegistrationType *	m_Registration {}

Member Typedef Documentation

◆ ConstPointer

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ConstPointer = itk::SmartPointer<const Self>

Definition at line 65 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ ITKBaseType

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ITKBaseType = typename Superclass2::ITKBaseType

Definition at line 129 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ Pointer

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Pointer = itk::SmartPointer<Self>

Definition at line 64 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ Self

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Self = SumSquaredTissueVolumeDifferenceMetric

Standard ITK-stuff.

Definition at line 59 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ Superclass1

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Superclass1 = itk::SumSquaredTissueVolumeDifferenceImageToImageMetric<typename MetricBase<TElastix>::FixedImageType, typename MetricBase<TElastix>::MovingImageType>

Definition at line 60 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ Superclass2

template<class TElastix >

using elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Superclass2 = MetricBase<TElastix>

Definition at line 63 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

◆ TransformType

template<class TElastix >

using itk::SumSquaredTissueVolumeDifferenceImageToImageMetric< TFixedImage, TMovingImage >::TransformType = typename Superclass::AdvancedTransformType

Typedefs from the AdvancedTransform.

Definition at line 120 of file itkSumSquaredTissueVolumeDifferenceImageToImageMetric.h.

Constructor & Destructor Documentation

◆ SumSquaredTissueVolumeDifferenceMetric()

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::SumSquaredTissueVolumeDifferenceMetric ( )

protecteddefault

The constructor.

◆ ~SumSquaredTissueVolumeDifferenceMetric()

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::~SumSquaredTissueVolumeDifferenceMetric ( )

overrideprotecteddefault

The destructor.

Member Function Documentation

◆ BeforeEachResolution()

template<class TElastix >

void elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::BeforeEachResolution ( )

overridevirtual

Do some things before each resolution:

Set AirValue setting
Set TissueValue setting

Reimplemented from elastix::BaseComponent.

◆ elxClassNameMacro()

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::elxClassNameMacro ( "SumSquaredTissueVolumeDifference" )

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "SumSquaredTissueVolumeDifference")

◆ GetClassName()

template<class TElastix >

virtual const char * elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

◆ Initialize()

template<class TElastix >

void elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::Initialize ( )

override

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

◆ ITK_DISALLOW_COPY_AND_MOVE()

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::ITK_DISALLOW_COPY_AND_MOVE ( SumSquaredTissueVolumeDifferenceMetric< TElastix > )

◆ itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

◆ itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

◆ New()

template<class TElastix >

static Pointer elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::New ( )

static

Method for creation through the object factory.

Field Documentation

◆ elxOverrideGetSelfMacro

template<class TElastix >

elastix::SumSquaredTissueVolumeDifferenceMetric< TElastix >::elxOverrideGetSelfMacro

private

Definition at line 153 of file elxSumSquaredTissueVolumeDifferenceMetric.h.

Detailed Description

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Attributes

Additional Inherited Members

Member Typedef Documentation

◆ ConstPointer

◆ ITKBaseType

◆ Pointer

◆ Self

◆ Superclass1

◆ Superclass2

◆ TransformType

Constructor & Destructor Documentation

◆ SumSquaredTissueVolumeDifferenceMetric()

◆ ~SumSquaredTissueVolumeDifferenceMetric()

Member Function Documentation

◆ BeforeEachResolution()

◆ elxClassNameMacro()

◆ GetClassName()

◆ Initialize()

◆ ITK_DISALLOW_COPY_AND_MOVE()

◆ itkStaticConstMacro() [1/2]

◆ itkStaticConstMacro() [2/2]

◆ New()

Field Documentation

◆ elxOverrideGetSelfMacro