#include <itkCyclicBSplineDeformableTransform.h>

Detailed Description

template<class TScalarType = double, unsigned int NDimensions = 3, unsigned int VSplineOrder = 3>
class itk::CyclicBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >

Deformable transform using a B-spline representation in which the B-spline grid is formulated in a cyclic way.

Definition at line 44 of file itkCyclicBSplineDeformableTransform.h.

Inheritance diagram for itk::CyclicBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >:

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Public Types
using	ConstPointer = SmartPointer< const Self >

using	ContinuousIndexType = typename WeightsFunctionType::ContinuousIndexType

using	DirectionType = typename ImageType::DirectionType

using	GridOffsetType = typename RegionType::IndexType

using	ImagePointer = typename ImageType::Pointer

using	ImageType = Image< PixelType, Self::SpaceDimension >

using	IndexType = typename RegionType::IndexType

using	JacobianImageType = Image< JacobianPixelType, Self::SpaceDimension >

using	JacobianPixelType = typename JacobianType::ValueType

using	OriginType = typename ImageType::PointType

using	ParameterIndexArrayType = Array< unsigned long >

using	Pointer = SmartPointer< Self >

using	RedContinuousIndexType = typename RedWeightsFunctionType::ContinuousIndexType

using	RedWeightsFunctionType = BSplineInterpolationWeightFunction2< ScalarType, Self::SpaceDimension - 1, VSplineOrder >

using	RegionType = ImageRegion< Self::SpaceDimension >

using	Self = CyclicBSplineDeformableTransform

using	SizeType = typename RegionType::SizeType

using	SpacingType = typename ImageType::SpacingType

using	Superclass = AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >

using	WeightsFunctionType = BSplineInterpolationWeightFunction2< ScalarType, Self::SpaceDimension, VSplineOrder >

using	WeightsType = typename WeightsFunctionType::WeightsType

Public Types inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
using	ConstPointer = SmartPointer< const Self >

using	ContinuousIndexType = typename WeightsFunctionType::ContinuousIndexType

using	DerivativeWeightsFunctionPointer = typename DerivativeWeightsFunctionType::Pointer

using	DerivativeWeightsFunctionType = BSplineInterpolationDerivativeWeightFunction< ScalarType, Self::SpaceDimension, VSplineOrder >

using	DirectionType = typename ImageType::DirectionType

using	GridOffsetType = IndexType

using	ImagePointer = typename ImageType::Pointer

using	ImageType = Image< PixelType, Self::SpaceDimension >

using	IndexType = typename RegionType::IndexType

using	OriginType = typename ImageType::PointType

using	ParameterIndexArrayType = Array< unsigned long >

using	Pointer = SmartPointer< Self >

using	RegionType = ImageRegion< Self::SpaceDimension >

using	Self = AdvancedBSplineDeformableTransform

using	SizeType = typename RegionType::SizeType

using	SODerivativeWeightsFunctionPointer = typename SODerivativeWeightsFunctionType::Pointer

using	SODerivativeWeightsFunctionType = BSplineInterpolationSecondOrderDerivativeWeightFunction< ScalarType, Self::SpaceDimension, VSplineOrder >

using	SpacingType = typename ImageType::SpacingType

using	Superclass = AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >

using	WeightsFunctionPointer = typename WeightsFunctionType::Pointer

using	WeightsFunctionType = BSplineInterpolationWeightFunction2< ScalarType, Self::SpaceDimension, VSplineOrder >

using	WeightsType = typename WeightsFunctionType::WeightsType

Public Types inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
using	ConstPointer = SmartPointer< const Self >

using	ContinuousIndexType = ContinuousIndex< ScalarType, SpaceDimension >

using	DirectionType = typename ImageType::DirectionType

using	GridOffsetType = IndexType

using	ImagePointer = typename ImageType::Pointer

using	ImageType = Image< PixelType, Self::SpaceDimension >

using	IndexType = typename RegionType::IndexType

using	OriginType = typename ImageType::PointType

using	ParameterIndexArrayType = Array< unsigned long >

using	Pointer = SmartPointer< Self >

using	RegionType = ImageRegion< Self::SpaceDimension >

using	Self = AdvancedBSplineDeformableTransformBase

using	SizeType = typename RegionType::SizeType

using	SpacingType = typename ImageType::SpacingType

using	Superclass = AdvancedTransform< TScalarType, NDimensions, NDimensions >

Public Types inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
using	ConstPointer = SmartPointer< const Self >

using	InternalMatrixType = typename SpatialJacobianType::InternalMatrixType

using	InverseTransformBaseType = typename Superclass::InverseTransformBaseType

using	JacobianOfSpatialHessianType = std::vector< SpatialHessianType >

using	JacobianOfSpatialJacobianType = std::vector< SpatialJacobianType >

using	MovingImageGradientType = OutputCovariantVectorType

using	MovingImageGradientValueType = typename MovingImageGradientType::ValueType

using	NonZeroJacobianIndicesType = std::vector< unsigned long >

using	Pointer = SmartPointer< Self >

using	Self = AdvancedTransform

using	SpatialHessianType = FixedArray< Matrix< ScalarType, InputSpaceDimension, InputSpaceDimension >, OutputSpaceDimension >

using	SpatialJacobianType = Matrix< ScalarType, OutputSpaceDimension, InputSpaceDimension >

using	Superclass = Transform< TScalarType, NInputDimensions, NOutputDimensions >

using	TransformType = Transform< TScalarType, NInputDimensions, NOutputDimensions >

using	TransformTypeConstPointer = typename TransformType::ConstPointer

using	TransformTypePointer = typename TransformType::Pointer

Public Member Functions
virtual const char *	GetClassName () const

virtual void	GetJacobian (const InputPointType &inputPoint, WeightsType &weights, ParameterIndexArrayType &indices) const

void	GetSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj) const override

	ITK_DISALLOW_COPY_AND_MOVE (CyclicBSplineDeformableTransform)

	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)

	itkStaticConstMacro (SplineOrder, unsigned int, VSplineOrder)

void	SetGridRegion (const RegionType &region) override

OutputPointType	TransformPoint (const InputPointType &point) const override

Public Member Functions inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
void	EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override

virtual const char *	GetClassName () const

void	GetJacobian (const InputPointType &inputPoint, JacobianType &j, NonZeroJacobianIndicesType &nzji) const override

void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override

void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override

void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override

void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override

unsigned int	GetNumberOfAffectedWeights () const override

NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const override

unsigned long	GetNumberOfWeights () const

void	GetSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh) const override

void	GetSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj) const override

	ITK_DISALLOW_COPY_AND_MOVE (AdvancedBSplineDeformableTransform)

	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)

	itkStaticConstMacro (SplineOrder, unsigned int, VSplineOrder)

void	SetGridRegion (const RegionType &region) override

OutputPointType	TransformPoint (const InputPointType &point) const override

Public Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
virtual const char *	GetClassName () const

virtual const ImagePointer *	GetCoefficientImages () const

const FixedParametersType &	GetFixedParameters () const override

virtual DirectionType	GetGridDirection () const

virtual OriginType	GetGridOrigin () const

virtual RegionType	GetGridRegion () const

virtual SpacingType	GetGridSpacing () const

virtual unsigned int	GetNumberOfAffectedWeights () const =0

NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const override=0

NumberOfParametersType	GetNumberOfParameters () const override

virtual NumberOfParametersType	GetNumberOfParametersPerDimension () const

const ParametersType &	GetParameters () const override

unsigned	GetSplineOrder () const

TransformCategoryEnum	GetTransformCategory () const override

virtual const RegionType &	GetValidRegion ()

bool	IsLinear () const override

	ITK_DISALLOW_COPY_AND_MOVE (AdvancedBSplineDeformableTransformBase)

	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)

virtual void	SetCoefficientImages (ImagePointer images[])

void	SetFixedParameters (const FixedParametersType &parameters) override

virtual void	SetGridDirection (const DirectionType &direction)

virtual void	SetGridOrigin (const OriginType &origin)

virtual void	SetGridRegion (const RegionType &region)=0

virtual void	SetGridSpacing (const SpacingType &spacing)

void	SetIdentity ()

void	SetParameters (const ParametersType &parameters) override

void	SetParametersByValue (const ParametersType &parameters) override

OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const override

OutputVectorType	TransformVector (const InputVectorType &) const override

OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const override

Public Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override

virtual void	EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const

virtual const char *	GetClassName () const

virtual bool	GetHasNonZeroJacobianOfSpatialHessian () const

virtual bool	GetHasNonZeroSpatialHessian () const

virtual void	GetJacobian (const InputPointType &inputPoint, JacobianType &j, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const =0

virtual void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const =0

virtual void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const =0

virtual void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const =0

virtual void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const =0

virtual NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const

virtual void	GetSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh) const =0

virtual void	GetSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj) const =0

	ITK_DISALLOW_COPY_AND_MOVE (AdvancedTransform)

	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)

	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
static Pointer	New ()

Static Public Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
template<template< class, unsigned, unsigned > class TBSplineDeformableTransform>
static Pointer	Create (const unsigned splineOrder)

Protected Member Functions
void	ComputeNonZeroJacobianIndices (NonZeroJacobianIndicesType &nonZeroJacobianIndices, const RegionType &supportRegion) const override

	CyclicBSplineDeformableTransform ()

bool	InsideValidRegion (const ContinuousIndexType &index) const override

virtual void	SplitRegion (const RegionType &imageRegion, const RegionType &inRegion, RegionType &outRegion1, RegionType &outRegion2) const

	~CyclicBSplineDeformableTransform () override=default

Protected Member Functions inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
	AdvancedBSplineDeformableTransform ()

void	ComputeNonZeroJacobianIndices (NonZeroJacobianIndicesType &nonZeroJacobianIndices, const RegionType &supportRegion) const override

	itkGetModifiableObjectMacro (WeightsFunction, WeightsFunctionType)

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetWeightsFunction (WeightsFunctionType *_arg)

void	WrapAsImages ()

	~AdvancedBSplineDeformableTransform () override=default

Protected Member Functions inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
	AdvancedBSplineDeformableTransformBase ()=delete

	AdvancedBSplineDeformableTransformBase (const unsigned splineOrder)

virtual void	ComputeNonZeroJacobianIndices (NonZeroJacobianIndicesType &nonZeroJacobianIndices, const RegionType &supportRegion) const =0

virtual bool	InsideValidRegion (const ContinuousIndexType &index) const

void	PrintSelf (std::ostream &os, Indent indent) const override

ContinuousIndexType	TransformPointToContinuousGridIndex (const InputPointType &point) const

void	UpdateGridOffsetTable ()

void	UpdatePointIndexConversions ()

void	WrapAsImages ()

	~AdvancedBSplineDeformableTransformBase () override=default

Protected Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
	AdvancedTransform ()=default

	~AdvancedTransform () override=default

Additional Inherited Members
Static Public Attributes inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
static constexpr unsigned int	NumberOfFixedParameters = NDimensions * (NDimensions + 3)

Protected Types inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
using	JacobianImageType = Image< JacobianPixelType, Self::SpaceDimension >

using	JacobianPixelType = typename JacobianType::ValueType

Protected Types inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
using	JacobianImageType = Image< JacobianPixelType, Self::SpaceDimension >

using	JacobianPixelType = typename JacobianType::ValueType

Protected Attributes inherited from itk::AdvancedBSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >
std::vector< DerivativeWeightsFunctionPointer >	m_DerivativeWeightsFunctions

std::vector< std::vector< SODerivativeWeightsFunctionPointer > >	m_SODerivativeWeightsFunctions

WeightsFunctionPointer	m_WeightsFunction

Protected Attributes inherited from itk::AdvancedBSplineDeformableTransformBase< TScalarType, NDimensions >
ImagePointer	m_CoefficientImages [NDimensions]

DirectionType	m_GridDirection { DirectionType::GetIdentity() }

GridOffsetType	m_GridOffsetTable {}

OriginType	m_GridOrigin {}

RegionType	m_GridRegion {}

SpacingType	m_GridSpacing { 1.0 }

DirectionType	m_IndexToPoint

const ParametersType *	m_InputParametersPointer

ParametersType	m_InternalParametersBuffer

JacobianImageType::Pointer	m_JacobianImage [NDimensions]

IndexType	m_LastJacobianIndex

unsigned long	m_Offset

DirectionType	m_PointToIndexMatrix

SpatialJacobianType	m_PointToIndexMatrix2

FixedArray< ScalarType, NDimensions >	m_PointToIndexMatrixDiagonal

FixedArray< ScalarType, NDimensions *NDimensions >	m_PointToIndexMatrixDiagonalProducts

bool	m_PointToIndexMatrixIsDiagonal

DirectionType	m_PointToIndexMatrixTransposed

SpatialJacobianType	m_PointToIndexMatrixTransposed2

SizeType	m_SupportSize

RegionType	m_ValidRegion

ContinuousIndexType	m_ValidRegionBegin

ContinuousIndexType	m_ValidRegionEnd

ImagePointer	m_WrappedImage [NDimensions]

Protected Attributes inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
bool	m_HasNonZeroJacobianOfSpatialHessian { true }

bool	m_HasNonZeroSpatialHessian { true }