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elxVarianceOverLastDimensionMetric.h
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1/*=========================================================================
2 *
3 * Copyright UMC Utrecht and contributors
4 *
5 * Licensed under the Apache License, Version 2.0 (the "License");
6 * you may not use this file except in compliance with the License.
7 * You may obtain a copy of the License at
8 *
9 * http://www.apache.org/licenses/LICENSE-2.0.txt
10 *
11 * Unless required by applicable law or agreed to in writing, software
12 * distributed under the License is distributed on an "AS IS" BASIS,
13 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 * See the License for the specific language governing permissions and
15 * limitations under the License.
16 *
17 *=========================================================================*/
18#ifndef elxVarianceOverLastDimensionMetric_h
19#define elxVarianceOverLastDimensionMetric_h
20
21#include "elxIncludes.h" // include first to avoid MSVS warning
24#include "itkStackTransform.h"
25
26namespace elastix
27{
28
66template <class TElastix>
67class ITK_TEMPLATE_EXPORT VarianceOverLastDimensionMetric
68 : public itk::VarianceOverLastDimensionImageMetric<typename MetricBase<TElastix>::FixedImageType,
69 typename MetricBase<TElastix>::MovingImageType>
70 , public MetricBase<TElastix>
71{
72public:
74
80 using Pointer = itk::SmartPointer<Self>;
81 using ConstPointer = itk::SmartPointer<const Self>;
82
84 itkNewMacro(Self);
85
88
93 elxClassNameMacro("VarianceOverLastDimensionMetric");
94
96 using typename Superclass1::CoordinateRepresentationType;
97 using typename Superclass1::ScalarType;
98 using typename Superclass1::MovingImageType;
99 using typename Superclass1::MovingImagePixelType;
100 using typename Superclass1::MovingImageConstPointer;
101 using typename Superclass1::FixedImageType;
102 using typename Superclass1::FixedImageConstPointer;
103 using typename Superclass1::FixedImageRegionType;
104 using typename Superclass1::FixedImageSizeType;
105 using typename Superclass1::TransformType;
106 using typename Superclass1::TransformPointer;
107 using typename Superclass1::InputPointType;
108 using typename Superclass1::OutputPointType;
109 using typename Superclass1::TransformParametersType;
110 using typename Superclass1::TransformJacobianType;
111 using typename Superclass1::InterpolatorType;
112 using typename Superclass1::InterpolatorPointer;
113 using typename Superclass1::RealType;
114 using typename Superclass1::GradientPixelType;
115 using typename Superclass1::GradientImageType;
116 using typename Superclass1::GradientImagePointer;
117 using typename Superclass1::GradientImageFilterType;
118 using typename Superclass1::GradientImageFilterPointer;
119 using typename Superclass1::FixedImageMaskType;
120 using typename Superclass1::FixedImageMaskPointer;
121 using typename Superclass1::MovingImageMaskType;
122 using typename Superclass1::MovingImageMaskPointer;
123 using typename Superclass1::MeasureType;
124 using typename Superclass1::DerivativeType;
125 using typename Superclass1::ParametersType;
128 using typename Superclass1::ImageSamplerType;
137
139 itkStaticConstMacro(FixedImageDimension, unsigned int, FixedImageType::ImageDimension);
140
142 itkStaticConstMacro(MovingImageDimension, unsigned int, MovingImageType::ImageDimension);
143
145 using typename Superclass2::ElastixType;
146 using typename Superclass2::RegistrationType;
148
155
159 void
160 Initialize() override;
161
166 void
168
174 void
176
177protected:
182
183private:
185};
186
187} // end namespace elastix
188
189#ifndef ITK_MANUAL_INSTANTIATION
190# include "elxVarianceOverLastDimensionMetric.hxx"
191#endif
192
193#endif // end #ifndef elxVarianceOverLastDimensionMetric_h
This class is the elastix base class for all Metrics.
Definition: elxMetricBase.h:73
itk::SingleValuedCostFunction ITKBaseType
Definition: elxMetricBase.h:97
typename ElastixType::MovingImageType MovingImageType
Definition: elxMetricBase.h:92
typename ElastixType::RegistrationBaseType RegistrationType
Compute the sum of variances over the slowest varying dimension in the moving image.
itkStaticConstMacro(MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
elxClassNameMacro("VarianceOverLastDimensionMetric")
~VarianceOverLastDimensionMetric() override=default
itkStaticConstMacro(FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
ITK_DISALLOW_COPY_AND_MOVE(VarianceOverLastDimensionMetric)
Base class for deformable transform using a B-spline representation.
This class combines two transforms: an 'initial transform' with a 'current transform'.
typename TransformType::ScalarType ScalarType
This class is a base class for any image sampler.
Base class for all ITK limiter function objects.
Implements stack of transforms: one for every last dimension index.
Compute the sum of variances over the slowest varying dimension in the moving image.
typename ImageSamplerType::OutputVectorContainerPointer ImageSampleContainerPointer
typename MovingImageType::RegionType MovingImageRegionType
typename FixedImageType::PixelType FixedImagePixelType
typename ImageSamplerType::OutputVectorContainerType ImageSampleContainerType
typename MovingImageLimiterType::OutputType MovingImageLimiterOutputType
typename FixedImageLimiterType::OutputType FixedImageLimiterOutputType
typename ImageSamplerType::Pointer ImageSamplerPointer
typename FixedImageRegionType::SizeType FixedImageSizeType


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