intrapatient; rigid + B-spline transformation; statistical shape regularization
More details about the data are described in .
Inter patient registration of cervical images.
For parameter files see the Elastix Model Zoo repository on GitHub.
elastix version: 4.5
In this work the StatisticalShapePenalty module is introduced in elastix. In order to use this as a metric you need to build elastix from source with the cmake option StatisticalShapePenalty selected.
An additional script is used to generate the model from a training set. The python script together with an example training set is provided on the GitHub repo.
The method and experiments are published in:
 F.F. Berendsen et al., Free-form image registration regularized by a statistical shape model: application to organ segmentation in cervical MR, Comput. Vis. Image Understand. (2013),
© 2020 Viktor van der Valk