Par0026 - elastix

Registration Description

intra-subject, longitudinal data; rigid + affine + B-spline transformation

Image data

Screen shot:


An example of the co-registered rat brain data: two time-points for subject S1 are shown. On the left we see time-point 14m and on the right time-point 16m.


Registration Settings

For parameter files see the Elastix Model Zoo repository on GitHub.

elastix version: 4.500


A fixed image mask was always used.

Command line call:

elastix -f FixedImage_i.mhd -m MovingImage_j.mhd -fMask FixedImageMask_i -p par0026.txt -out outputdir

with: = one of {rigid, affine, bspline}

Published in

[1] L. Hammelrath, A. Khmelinskii, C. Po, E. Pracht, H. Endepols, H. Backes, C. Schäfer, M. Staring, B.P.F. Lelieveldt and M. Hoehn, "," in preparation, 2016

© 2020 Viktor van der Valk