Par0034 - elastix

Registration Description

inter-subject; rigid + affine + B-spline transformation; advanced normalized correlation + mutual information metric with a transform bending energy penalty

Image data

Screen shot:


An example of the co-registered mouse brain data: on the right you see the used template image.


Registration Settings

For parameter files see the Elastix Model Zoo repository on GitHub.

elastix version: 4.700


A template image was registered to all data. The template image was the moving image.

Command line call:

elastix -f FixedImage_i.mhd -m MovingImage_j.mhd -p par0034.txt -out outputdir

with: = one of {rigid, affine, bspline}

Published in

[1] [D.I. Bink et al., "," in preparation 2016]

© 2020 Viktor van der Valk